Basic Information
Locus ID:
BniB07g031210.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 41722289 | 41724485 | + | BniB07g031210.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 75,808.46 Da | 37.00 | 91.31 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 46 | 87 | 5.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 139 | 199 | 1.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 373 | 639 | 2.4E-27 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 232 | 1.97E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 374 | 644 | 8.31E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 445 | 1.4E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 446 | 653 | 4.7E-40 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 242 | 1.2E-37 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 370 | 644 | 25.700571 | IPR000719 |
| Coils | Coil | Coil | 624 | 644 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20190.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_009135668.1 | pollen receptor-like kinase 4 isoform X1 [Brassica rapa] | 0 |
| Q9LJY0 | Pollen receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=PRK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8B026 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019094 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology