Basic Information
Locus ID:
BniB07g030380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 41211893 | 41214371 | + | BniB07g030380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 65,924.66 Da | 54.12 | 87.92 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 133 | 393 | 2.35371E-124 | - |
| Pfam | PF00069 | Protein kinase domain | 134 | 394 | 1.9E-67 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 428 | 576 | 3.99E-12 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 127 | 413 | 1.09E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 435 | 504 | 4.2E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 416 | 574 | 4.2E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 129 | 218 | 2.2E-20 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 219 | 415 | 9.3E-59 | - |
| SMART | SM00220 | serkin_6 | 132 | 394 | 1.9E-94 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 132 | 394 | 50.095856 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 256 | 268 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 138 | 164 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19100.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013629437.1 | PREDICTED: CDPK-related kinase 2-like [Brassica oleracea var. oleracea] | 0 |
| Q9LJL9 | CDPK-related kinase 2 OS=Arabidopsis thaliana OX=3702 GN=CRK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VQS4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_019023 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology