Basic Information
Locus ID:
BniB07g029680.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 40688424 | 40688896 | - | BniB07g029680.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.21 | 15,265.72 Da | 40.69 | 98.76 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 8 | 129 | 1.7E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 129 | 9.55E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 82 | 3.9E-33 | - |
| SMART | SM00220 | serkin_6 | 3 | 129 | 9.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3 | 129 | 18.02581 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 9 | 33 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05840.1 | Protein kinase superfamily protein. encodes a SHAGGY-like kinase involved in meristem organization. | 0 |
| RefSeq | XP_010493929.1 | PREDICTED: shaggy-related protein kinase alpha isoform X2 [Camelina sativa] | 0 |
| P43289 | Shaggy-related protein kinase gamma OS=Arabidopsis thaliana OX=3702 GN=ASK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251NY27 | non-specific serine/threonine protein kinase OS=Prunus persica OX=3760 GN=PRUPE_6G307000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 2 | Ah016390, Ah033370 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg36297, Sbi_jg36299 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl01217 |
| Brassicaceae | Brassica nigra | 1 | BniB07g029680.2N |
| Poaceae | Oryza coarctata | 2 | Oco06G029160, Oco23G009390 |
| Poaceae | Thinopyrum elongatum | 4 | Tel2E01G1045700, Tel2E01G622000, Tel3E01G579800 ... |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1BG005820, gene_TRIDC7AG067580 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34434 |