Basic Information
Locus ID:
BniB07g028540.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
PTI1-like tyrosine-protein kinase At3g15890
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 39896709 | 39898321 | + | BniB07g028540.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 40,072.65 Da | 43.16 | 81.88 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 41 | 301 | 1.1E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 301 | 1.62E-65 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 115 | 318 | 6.8E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 114 | 1.0E-32 | - |
| PIRSF | PIRSF000654 | ILK | 7 | 315 | 8.4E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 318 | 32.824108 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 161 | 173 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 45 | 67 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 303 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 351 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15890.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018432709.1 | PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Raphanus sativus] | 0 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6J0JCU2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Raphanus sativus OX=3726 GN=LOC108805223 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology