Basic Information
Locus ID:
BniB07g027910.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
leucine-rich repeat receptor-like serine threonine-protein kinase At3g14840
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 39513571 | 39532924 | + | BniB07g027910.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.54 | 251,407.66 Da | 34.85 | 89.82 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1929 | 2196 | 2.38075E-97 | - |
| CDD | cd14066 | STKc_IRAK | 664 | 931 | 1.28662E-95 | - |
| Pfam | PF11721 | Malectin domain | 405 | 587 | 1.1E-44 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 1672 | 1852 | 2.5E-44 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1927 | 2193 | 2.5E-45 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 661 | 926 | 4.4E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 1330 | 1610 | 5.1E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 341 | 6.46E-54 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 640 | 934 | 2.73E-79 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1905 | 2198 | 4.37E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1890 | 1998 | 1.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 189 | 1.8E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 625 | 733 | 4.9E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2000 | 2208 | 7.1E-59 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 735 | 946 | 1.4E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1302 | 1467 | 5.2E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 399 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1472 | 1664 | 5.0E-34 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 403 | 591 | 3.1E-34 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1670 | 1855 | 1.5E-34 | - |
| SMART | SM00220 | serkin_6 | 658 | 935 | 6.0E-30 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1923 | 2200 | 1.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 658 | 935 | 38.421173 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1923 | 2200 | 38.180893 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 780 | 792 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 2045 | 2057 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14840.2 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_024161227.2 | uncharacterized protein LOC112168332 [Rosa chinensis] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VQS3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018861 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology