Basic Information
Locus ID:
BniB07g025880.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 38225905 | 38227087 | + | BniB07g025880.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.36 | 21,830.92 Da | 50.54 | 72.79 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 164 | 200 | 1.97338E-16 | - |
| Pfam | PF01849 | NAC domain | 59 | 114 | 2.8E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 162 | 200 | 3.8E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 65 | 118 | 2.9E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 162 | 199 | 2.0E-18 | - |
| SMART | SM01407 | NAC_2 | 59 | 115 | 5.0E-26 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 24 | 201 | 2.4E-62 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 56 | 121 | 18.028481 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 68 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_018467152.1 | PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Raphanus sativus] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VQK4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology