Basic Information
Locus ID:
BniB07g018580.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
DNAJ heat shock N-terminal domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 31559458 | 31560687 | - | BniB07g018580.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.92 | 45,634.20 Da | 33.75 | 51.34 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 2.27943E-16 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 6.5E-19 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 54 | 129 | 2.88E-20 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 56 | 147 | 1.4E-20 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 7.4E-18 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 16.705923 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 5.9E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 5.9E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 129 | 148 | 5.9E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 5.9E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 377 | 409 | - | - |
| Coils | Coil | Coil | 304 | 324 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37380.1 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_013686927.2 | uncharacterized protein LOC106390922 [Brassica napus] | 0 |
| P48353 | Protein HLJ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=HLJ1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VPI0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018097 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology