Basic Information
Locus ID:
BniB07g018380.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 31211931 | 31220899 | - | BniB07g018380.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 83,634.14 Da | 36.17 | 79.82 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 90 | 414 | 1.23505E-79 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 152 | 241 | 2.1E-22 | IPR032861 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 578 | 751 | 4.2E-56 | IPR032861 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 91 | 150 | 7.9E-21 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 264 | 410 | 6.4E-29 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 86 | 417 | 2.38E-83 | IPR021109 |
| SUPERFAMILY | SSF50630 | Acid proteases | 573 | 770 | 2.12E-52 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 241 | 419 | 8.5E-46 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 557 | 751 | 3.4E-53 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 71 | 240 | 8.6E-43 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 91 | 410 | 41.577194 | IPR033121 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 578 | 776 | 24.903437 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 296 | 307 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_009108074.1 | aspartic proteinase CDR1 [Brassica rapa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VPE5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018081 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology