Basic Information
Locus ID:
BniB07g018020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 30688451 | 30691219 | + | BniB07g018020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.87 | 81,534.14 Da | 51.41 | 78.31 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 12 | 148 | 1.71655E-51 | - |
| Pfam | PF00582 | Universal stress protein family | 11 | 138 | 2.1E-11 | IPR006016 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 417 | 673 | 1.8E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 390 | 673 | 6.88E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 10 | 142 | 5.11E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 486 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 695 | 7.8E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 10 | 145 | 1.4E-9 | IPR014729 |
| SMART | SM00220 | serkin_6 | 414 | 677 | 3.2E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 414 | 677 | 35.410629 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 532 | 544 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 185 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 185 | - | - |
| Coils | Coil | Coil | 288 | 308 | - | - |
| Coils | Coil | Coil | 330 | 357 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35380.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_013601209.1 | PREDICTED: U-box domain-containing protein 35 [Brassica oleracea var. oleracea] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7VNR5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018046 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology