Basic Information
Locus ID:
BniB07g018010.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase RLK
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 30685776 | 30687818 | - | BniB07g018010.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 72,484.79 Da | 37.79 | 91.50 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 62 | 1.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 173 | 1.2E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 351 | 616 | 1.7E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 622 | 2.81E-48 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 205 | 1.17E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 135 | 3.2E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 227 | 1.9E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 641 | 5.8E-38 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 314 | 422 | 1.2E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 347 | 632 | 26.379004 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 621 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 630 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 313 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_009108026.1 | pollen receptor-like kinase 1 [Brassica rapa] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VPQ9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_018045 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology