halophFGD

Basic Information

Locus ID: BniB07g014980.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B7	24756141	24757339	-	BniB07g014980.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.28	32,724.53 Da	33.09	79.41	-0.53

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00069	Protein kinase domain	59	158	7.0E-17	IPR000719
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	45	183	9.86E-35	IPR011009
Gene3D	G3DSA:1.25.40.570	-	1	66	1.0E-9	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	67	202	1.5E-21	-
SMART	SM00220	serkin_6	1	196	2.8E-5	IPR000719
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	290	17.757263	IPR000719
ProSitePatterns	PS00108	Serine/Threonine protein kinases active-site signature.	91	103	-	IPR008271
MobiDBLite	mobidb-lite	consensus disorder prediction	238	290	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	244	290	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G16670.1	Protein kinase superfamily protein.
RefSeq	XP_009149104.1	cold-responsive protein kinase 1 [Brassica rapa]
Swiss-Prot	Q93YN1	Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1
TrEMBL	A0A8X7QDJ8	Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_062999 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Brassicaceae	Brassica nigra	3	BniB06g030530.2N, BniB06g030540.2N, BniB07g014980.2N
Poaceae	Sporobolus alterniflorus	1	Chr06G019770