Basic Information
Locus ID:
BniB07g010910.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 11067927 | 11069097 | - | BniB07g010910.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 23,856.47 Da | 42.09 | 88.93 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 109 | 1.3E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 104 | 2.93E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 73 | 105 | 3.0E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 158 | 180 | 4.3E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 72 | 3.0E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 126 | 157 | 4.3E-9 | - |
| SMART | SM00220 | serkin_6 | 2 | 155 | 4.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 205 | 9.912894 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53510.1 | mitogen-activated protein kinase 18. member of MAP Kinase | 0 |
| RefSeq | XP_013592598.1 | PREDICTED: mitogen-activated protein kinase 18 [Brassica oleracea var. oleracea] | 0 |
| Q9C5C0 | Mitogen-activated protein kinase 18 OS=Arabidopsis thaliana OX=3702 GN=MPK18 PE=1 SV=4 | 0 | |
| TrEMBL | A0A0E0C5Q4 | Protein kinase domain-containing protein OS=Oryza meridionalis OX=40149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_02.1391.V1.1, AsparagusV1_04.2346.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g010910.2N |
| Poaceae | Zea mays | 1 | Zm00001eb025520_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13596, nbis-gene-24744, nbis-gene-40726 |