Basic Information
Locus ID:
BniB07g009940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 9148581 | 9154266 | + | BniB07g009940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 117,678.59 Da | 45.09 | 78.53 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 657 | 941 | 2.6611E-162 | - |
| Pfam | PF00069 | Protein kinase domain | 651 | 936 | 7.9E-64 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 635 | 965 | 9.85E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 648 | 979 | 1.5E-107 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 731 | 953 | 1.5E-107 | - |
| SMART | SM00220 | serkin_6 | 651 | 936 | 9.7E-106 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 651 | 936 | 51.933277 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 937 | 1025 | 9.951368 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 770 | 782 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 36 | 50 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 809 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 834 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G45160.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009107455.2 | probable serine/threonine protein kinase IRE4 [Brassica rapa] | 0 |
| F4HPN2 | Probable serine/threonine protein kinase IRE4 OS=Arabidopsis thaliana OX=3702 GN=IRE4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8AXI2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_017574 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology