Basic Information
Locus ID:
BniB07g007430.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ATP binding kinase protein serine threonine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 6623615 | 6625620 | - | BniB07g007430.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.73 | 70,075.33 Da | 36.17 | 95.69 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 3.5E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 364 | 628 | 1.1E-37 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 214 | 2.47E-33 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 365 | 633 | 6.46E-58 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 329 | 435 | 3.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 436 | 642 | 3.8E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 190 | 6.5E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 361 | 633 | 32.612099 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 367 | 389 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 249 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 257 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_009107354.2 | probable inactive receptor kinase At1g48480 [Brassica rapa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VMX1 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_017418 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology