Basic Information
Locus ID:
BniB07g007420.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
serine threonine protein kinase IREH1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 6615525 | 6621779 | + | BniB07g007420.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 133,816.20 Da | 49.68 | 73.95 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05579 | STKc_MAST_like | 798 | 1086 | 6.12571E-169 | - |
| Pfam | PF00069 | Protein kinase domain | 793 | 1081 | 3.1E-65 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 789 | 1118 | 4.32E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 876 | 1099 | 2.3E-105 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 790 | 1110 | 2.3E-105 | - |
| SMART | SM00220 | serkin_6 | 792 | 1081 | 1.0E-102 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 792 | 1081 | 52.046349 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 1082 | 1182 | 10.916502 | IPR000961 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 911 | 923 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 448 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1122 | 1141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 55 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 659 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 116 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009107350.1 | probable serine/threonine protein kinase IRE3 isoform X2 [Brassica rapa] | 0 |
| F4HYG2 | Probable serine/threonine protein kinase IRE3 OS=Arabidopsis thaliana OX=3702 GN=IRE3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7VP22 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_017417 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology