Basic Information
Locus ID:
BniB07g006130.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 5238644 | 5241198 | - | BniB07g006130.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 66,875.57 Da | 52.44 | 84.18 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 141 | 401 | 6.24784E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 142 | 402 | 2.2E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 432 | 585 | 5.14E-14 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 132 | 440 | 1.34E-81 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 229 | 5.5E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 421 | 8.3E-59 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 428 | 582 | 1.6E-16 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 422 | 512 | 1.6E-16 | - |
| SMART | SM00220 | serkin_6 | 140 | 402 | 2.2E-95 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 140 | 402 | 50.420937 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 264 | 276 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 146 | 172 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 77 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49580.1 | Calcium-dependent protein kinase (CDPK) family protein. | 0 |
| RefSeq | XP_013599951.1 | PREDICTED: CDPK-related kinase 8 isoform X1 [Brassica oleracea var. oleracea] | 0 |
| Q9FX86 | CDPK-related kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8AXB3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_017320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology