Basic Information
Locus ID:
BniB07g004040.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
ubiquitin-protein transferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 3453873 | 3454154 | + | BniB07g004040.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.27 | 10,876.36 Da | 50.95 | 89.15 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51930.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_013624975.1 | PREDICTED: RING-H2 zinc finger protein RHA1a-like [Brassica oleracea var. oleracea] | 0 |
| TrEMBL | A0A0D3BMP6 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 4 | AT1G51930.1, AT5G41430.1, AT5G41440.1, AT5G41450.1 |
| Brassicaceae | Eutrema salsugineum | 3 | Thhalv10011950m.g.v1.0, Thhalv10011984m.g.v1.0 ... |
| Brassicaceae | Brassica nigra | 2 | BniB06g028750.2N, BniB07g004040.2N |