Basic Information
Locus ID:
BniB07g000790.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 1036557 | 1040045 | + | BniB07g000790.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 126,390.94 Da | 33.37 | 92.27 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 858 | 1128 | 2.0E-44 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 74 | 9.9E-8 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 372 | 388 | 0.55 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 276 | 335 | 5.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 662 | 720 | 1.7E-9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 198 | 213 | 0.38 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 473 | 532 | 6.5E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 837 | 1130 | 1.89E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 71 | 339 | 1.22E-42 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 271 | 559 | 2.35E-60 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 630 | 752 | 1.62E-26 | - |
| Gene3D | G3DSA:3.30.1490.310 | - | 576 | 633 | 0.0 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 932 | 1152 | 2.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 819 | 931 | 2.4E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 753 | 0.0 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 519 | 543 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 472 | 495 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 446 | 470 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 659 | 683 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 124 | 53.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 856 | 1130 | 9.1E-36 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 373 | 397 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 275 | 299 | 26.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 856 | 1133 | 38.407036 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 979 | 991 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 862 | 885 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1138 | 1162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1146 | 1162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G55610.1 | BRI1 like. mutant has Altered vascular cell differentiation; LRR Receptor Kinase | 0 |
| RefSeq | XP_013649385.2 | serine/threonine-protein kinase BRI1-like 1 [Brassica napus] | 0 |
| Q9ZWC8 | Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana OX=3702 GN=BRL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7VMD3 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_016939 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology