Basic Information
Locus ID:
BniB07g000310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B7 | 673906 | 691123 | + | BniB07g000310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 224,699.17 Da | 34.25 | 94.23 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 1722 | 1986 | 2.00857E-92 | - |
| CDD | cd14066 | STKc_IRAK | 698 | 960 | 2.3687E-98 | - |
| Pfam | PF11721 | Malectin domain | 425 | 611 | 7.5E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1719 | 1985 | 1.4E-45 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 1449 | 1635 | 1.5E-39 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 696 | 959 | 2.5E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 960 | 5.06E-82 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 1121 | 1423 | 2.83E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 98 | 410 | 7.14E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1692 | 1986 | 8.34E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1792 | 2001 | 6.1E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 654 | 767 | 5.1E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1679 | 1791 | 2.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1303 | 1425 | 6.7E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 214 | 1.7E-28 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 424 | 614 | 2.5E-30 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 1449 | 1636 | 2.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 972 | 6.8E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1113 | 1302 | 2.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 412 | 8.6E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 1192 | 1216 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1336 | 1360 | 84.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 692 | 960 | 1.4E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1716 | 1979 | 2.9E-26 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 692 | 950 | 38.124359 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1716 | 2001 | 36.244537 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1838 | 1850 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 812 | 824 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_048606206.1 | uncharacterized protein LOC106429068 [Brassica napus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A078I1P5 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=BnaC02g19770D PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology