Basic Information
Locus ID:
BniB06g068520.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 60694557 | 60695636 | - | BniB06g068520.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.20 | 39,463.23 Da | 44.44 | 81.17 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 110 | 153 | 7.1E-7 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 167 | 203 | 4.1E-5 | IPR006652 |
| Pfam | PF00646 | F-box domain | 4 | 36 | 0.001 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 47 | 8.37E-5 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 80 | 349 | 1.27E-38 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 72 | 355 | 1.2E-33 | IPR015915 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.083 | IPR006652 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 5.6E-5 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80440.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_009106748.1 | F-box/kelch-repeat protein At1g80440 [Brassica rapa] | 0 |
| Q9M8L2 | F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8B959 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008686 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology