Basic Information
Locus ID:
BniB06g067970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
STE20 SPS1-related proline-alanine-rich protein kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 60491404 | 60495248 | - | BniB06g067970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 74,232.25 Da | 48.33 | 81.77 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06610 | STKc_OSR1_SPAK | 12 | 275 | 6.97433E-169 | - |
| Pfam | PF00069 | Protein kinase domain | 14 | 275 | 1.2E-55 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 276 | 6.07E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 95 | 330 | 1.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 90 | 1.2E-28 | - |
| SMART | SM00220 | serkin_6 | 14 | 275 | 6.5E-87 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 275 | 45.558842 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 518 | - | - |
| Coils | Coil | Coil | 302 | 322 | - | - |
| Coils | Coil | Coil | 645 | 665 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79640.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018452521.1 | PREDICTED: serine/threonine-protein kinase BLUS1 isoform X2 [Raphanus sativus] | 0 |
| Q551H4 | Serine/threonine-protein kinase fray2 OS=Dictyostelium discoideum OX=44689 GN=fray2 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8X7TWR4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_084992 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology