Basic Information
Locus ID:
BniB06g067910.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 60466136 | 60470730 | - | BniB06g067910.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 135,559.38 Da | 45.74 | 70.19 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 174 | 270 | 1.11226E-45 | - |
| CDD | cd13999 | STKc_MAP3K-like | 957 | 1214 | 8.96863E-106 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 953 | 1213 | 4.3E-61 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 187 | 270 | 1.8E-18 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 187 | 272 | 5.4E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 944 | 1211 | 5.54E-74 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1039 | 1233 | 7.8E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 944 | 1038 | 4.5E-25 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 189 | 272 | 3.8E-9 | - |
| SMART | SM00220 | serkin_6 | 951 | 1222 | 8.8E-52 | IPR000719 |
| SMART | SM00666 | PB1_new | 185 | 272 | 7.6E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 951 | 1216 | 40.103119 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 957 | 982 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 720 | 732 | - | IPR018247 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1033 | 1046 | 8.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1185 | 1207 | 8.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1141 | 1163 | 8.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1070 | 1088 | 8.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 574 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 688 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_013587775.1 | PREDICTED: uncharacterized protein LOC106296238 [Brassica oleracea var. oleracea] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3P6H8X9 | Protein kinase domain-containing protein OS=Brassica oleracea OX=3712 GN=BOLC6T40358H PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology