Basic Information
Locus ID:
BniB06g066070.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 59323546 | 59325660 | + | BniB06g066070.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.40 | 76,378.53 Da | 39.31 | 86.25 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 371 | 640 | 2.38888E-95 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 22 | 246 | 9.0835E-78 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 22 | 250 | 5.3E-61 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 366 | 638 | 2.0E-53 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 674 | 2.83E-84 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 10 | 249 | 3.08E-61 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 441 | 5.2E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 662 | 6.7E-64 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 20 | 253 | 1.8E-66 | - |
| SMART | SM00220 | serkin_6 | 365 | 640 | 6.0E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 365 | 649 | 39.580158 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 485 | 497 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 371 | 394 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 132 | 138 | - | IPR019825 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_013613776.1 | PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Brassica oleracea var. oleracea] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7W9E6 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology