halophFGD

Basic Information

Locus ID: BniB06g066000.2N

Species & Taxonomic ID: Brassica nigra & 3710

Genome Assembly: N100

Description: Protein kinase domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
B6	59292890	59293216	-	BniB06g066000.2N

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.98	12,157.22 Da	27.16	110.19	0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	22	100	3.7E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	4	101	2.25E-12	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	2	108	1.1E-11	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G57730.1	Protein kinase superfamily protein.
RefSeq	XP_009139389.1	non-functional pseudokinase ZED1 [Brassica rapa]
Swiss-Prot	Q8VZF4	Serine/threonine-protein kinase ZRK3 OS=Arabidopsis thaliana OX=3702 GN=ZRK3 PE=1 SV=1
TrEMBL	M4FFD1	Protein kinase domain-containing protein OS=Brassica rapa subsp. pekinensis OX=51351 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	5	Ah007088, Ah011556, Ah031728, Ah031729, Ah031730
Amaranthaceae	Beta vulgaris	3	BVRB_6g142290, BVRB_9g210510, BVRB_9g210520
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg11963, Sbi_jg19328, Sbi_jg19329, Sbi_jg19330 ... Sbi_jg43889, Sbi_jg46895
Amaranthaceae	Salicornia europaea	4	Seu_jg18034, Seu_jg18035, Seu_jg21182, Seu_jg21183
Amaranthaceae	Suaeda glauca	12	Sgl54870, Sgl65478, Sgl65485, Sgl65499, Sgl65503, Sgl69828 ... Sgl69838, Sgl69842, Sgl69956, Sgl69957, Sgl80366, Sgl82828
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000016917, gene:ENSEOMG00000018381 ... gene:ENSEOMG00000018988, gene:ENSEOMG00000049020, gene:ENSEOMG00000049372, gene:ENSEOMG00000051141, gene:ENSEOMG00000051313, gene:ENSEOMG00000051838, gene:ENSEOMG00000052266
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.2AG0000600, CQ.Regalona.r1.2BG0001960 ... CQ.Regalona.r1.9AG0010160, CQ.Regalona.r1.9AG0010170, CQ.Regalona.r1.9BG0012290
Anacardiaceae	Pistacia vera	4	pistato.v30083920, pistato.v30084020, pistato.v30186420 ... pistato.v30213430
Brassicaceae	Arabidopsis thaliana	8	AT3G52530.1, AT3G57700.1, AT3G57710.1, AT3G57720.1 ... AT3G57730.1, AT3G57740.1, AT3G57750.1, AT3G57770.1
Brassicaceae	Eutrema salsugineum	10	Thhalv10000211m.g.v1.0, Thhalv10006056m.g.v1.0 ... Thhalv10006070m.g.v1.0, Thhalv10006071m.g.v1.0, Thhalv10006089m.g.v1.0, Thhalv10006091m.g.v1.0, Thhalv10006097m.g.v1.0, Thhalv10006099m.g.v1.0, Thhalv10006391m.g.v1.0, Thhalv10006481m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp3g24520.v2.2, Sp5g04920.v2.2, Sp5g04930.v2.2 ... Sp6g08210.v2.2
Brassicaceae	Brassica nigra	32	BniB02g036190.2N, BniB03g025360.2N, BniB05g018230.2N ... BniB05g058470.2N, BniB05g074590.2N, BniB06g001150.2N, BniB06g001410.2N, BniB06g049460.2N, BniB06g055490.2N, BniB06g055510.2N, BniB06g055520.2N, BniB06g055530.2N, BniB06g055550.2N, BniB06g063790.2N, BniB06g063800.2N, BniB06g063810.2N, BniB06g063820.2N, BniB06g063830.2N, BniB06g066000.2N, BniB08g015940.2N, BniB08g035220.2N, BniB08g040070.2N, BniB08g066680.2N, BniB08g072460.2N, BniB08g072470.2N, BniB08g072480.2N, BniB08g072490.2N, BniB08g072500.2N, BniB08g072510.2N, BniB08g072520.2N, BniB08g072530.2N, BniB08g072540.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq06G0281, Ceq06G0404, Ceq06G0405
Casuarinaceae	Casuarina glauca	2	Cgl06G0419, Cgl06G0420
Portulacaceae	Portulaca oleracea	3	evm.TU.LG04.1372, evm.TU.LG05.1895, evm.TU.LG10.866
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_10_RagTag.1248, evm.TU.Scaffold_1_RagTag.397 ... evm.TU.Scaffold_1_RagTag.398, evm.TU.Scaffold_2_RagTag.1852
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-1836, nbisL1-mrna-7787, nbisL1-mrna-7789 ... nbisL1-mrna-7791
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-13821, nbisL1-mrna-13822, nbisL1-mrna-16095 ... nbisL1-mrna-9956
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-13855, nbisL1-mrna-5431
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000004l.146, add.evm.TU.utg000012l.91
Rhizophoraceae	Kandelia obovata	1	Maker00010947
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-20136, nbisL1-mrna-20137, nbisL1-mrna-21932 ... nbisL1-mrna-23401
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-18028, nbisL1-mrna-546
Salicaceae	Populus euphratica	3	populus_peu33164, populus_peu33177, populus_peu38451
Solanaceae	Lycium barbarum	3	gene-LOC132610019, gene-LOC132610370, gene-LOC132610523
Solanaceae	Solanum chilense	3	SOLCI003675800, SOLCI003675900, SOLCI004975100
Solanaceae	Solanum pennellii	2	gene-LOC107021246, gene-LOC114077545