Basic Information
Locus ID:
BniB06g065600.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 59056297 | 59057959 | - | BniB06g065600.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 34,674.89 Da | 32.25 | 97.47 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 296 | 1.2E-68 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 299 | 3.64E-92 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 90 | 8.8E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 92 | 303 | 4.0E-68 | - |
| SMART | SM00220 | serkin_6 | 4 | 296 | 2.9E-97 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 296 | 43.989967 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 133 | 145 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54180.1 | cyclin-dependent kinase B1;1. Arabidopsis homolog of yeast cdc2, a protein kinase (cyclin-dependent kinase) that plays a central role in control of the mitotic cell cycle. | 0 |
| RefSeq | XP_009139259.1 | cyclin-dependent kinase B1-1 [Brassica rapa] | 0 |
| P25859 | Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana OX=3702 GN=CDKB1-1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8B8X9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008476 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology