Basic Information
Locus ID:
BniB06g064480.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
MAP kinase kinase kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 58475551 | 58476423 | - | BniB06g064480.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.46 | 32,151.61 Da | 39.72 | 86.69 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 20 | 218 | 1.1E-29 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 15 | 278 | 1.31E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 16 | 273 | 1.5E-42 | - |
| SMART | SM00220 | serkin_6 | 15 | 264 | 7.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 15 | 264 | 29.347143 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 21 | 43 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 137 | 149 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42550.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048609716.1 | mitogen-activated protein kinase kinase kinase 17-like [Brassica napus] | 0 |
| Q39008 | Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MEKK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X7WBV4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10006421m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g06220.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB06g064480.2N |