Basic Information
Locus ID:
BniB06g064200.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 58359946 | 58363027 | + | BniB06g064200.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.72 | 64,441.80 Da | 46.44 | 90.57 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 125 | 386 | 1.00645E-117 | - |
| Pfam | PF00069 | Protein kinase domain | 125 | 387 | 2.3E-67 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 419 | 567 | 1.17E-16 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 123 | 446 | 5.4E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 212 | 407 | 1.0E-55 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 408 | 570 | 3.5E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 121 | 211 | 1.3E-20 | - |
| SMART | SM00220 | serkin_6 | 125 | 387 | 2.1E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 125 | 387 | 47.339725 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 249 | 261 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 131 | 157 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009139075.1 | CDPK-related kinase 7 [Brassica rapa] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7W938 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_008349 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology