Basic Information
Locus ID:
BniB06g063800.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 58108281 | 58109294 | + | BniB06g063800.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 38,708.33 Da | 37.82 | 87.00 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 73 | 317 | 3.3E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 325 | 2.19E-44 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 138 | 335 | 3.4E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 130 | 3.3E-9 | - |
| SMART | SM00220 | serkin_6 | 57 | 327 | 3.5E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 53 | 326 | 21.955061 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57710.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_018460383.1 | PREDICTED: non-functional pseudokinase ZED1-like [Raphanus sativus] | 0 |
| Q9SVY5 | Serine/threonine-protein kinase ZRK1 OS=Arabidopsis thaliana OX=3702 GN=ZRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6J0LKA5 | non-functional pseudokinase ZED1-like OS=Raphanus sativus OX=3726 GN=LOC108831328 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology