Basic Information
Locus ID:
BniB06g059940.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
cellular macromolecule catabolic process
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 56251110 | 56251301 | + | BniB06g059940.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.67 | 7,382.30 Da | 22.90 | 95.78 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53945.1 | - | 0 |
| RefSeq | XP_006405576.1 | polyubiquitin [Eutrema salsugineum] | 0 |
| TrEMBL | V4LTB4 | Ubiquitin-like domain-containing protein OS=Eutrema salsugineum OX=72664 GN=EUTSA_v10028082mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G53980.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10012342m.g.v1.0, Thhalv10028077m.g.v1.0 ... |
| Brassicaceae | Brassica nigra | 2 | BniB06g059930.2N, BniB06g059940.2N |