Basic Information
Locus ID:
BniB06g057130.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 54757026 | 54758571 | + | BniB06g057130.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 56,625.52 Da | 47.84 | 85.18 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01603 | Protein phosphatase 2A regulatory B subunit (B56 family) | 74 | 487 | 3.7E-175 | IPR002554 |
| SUPERFAMILY | SSF48371 | ARM repeat | 88 | 469 | 1.37E-147 | IPR016024 |
| Gene3D | G3DSA:1.25.10.10 | - | 82 | 486 | 5.3E-177 | IPR011989 |
| PIRSF | PIRSF028043 | PP2A_B56 | 6 | 492 | 2.6E-222 | IPR002554 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04113 (Meiosis - yeast)
map04113 (Meiosis - yeast)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54930.1 | Protein phosphatase 2A regulatory B subunit family protein. | 0 |
| RefSeq | XP_018445861.1 | PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform isoform X1 [Raphanus sativus] | 0 |
| Q9SV41 | Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' epsilon isoform OS=Arabidopsis thaliana OX=3702 GN=B'EPSILON PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X8B5K2 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007712 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology