Basic Information
Locus ID:
BniB06g055760.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
CPK32
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 54007523 | 54010126 | + | BniB06g055760.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 61,033.79 Da | 39.48 | 82.13 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 441 | 502 | 1.09487E-19 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 63 | 321 | 2.32897E-138 | - |
| Pfam | PF13499 | EF-hand domain pair | 440 | 502 | 1.5E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 64 | 322 | 2.7E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 370 | 429 | 3.6E-8 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 351 | 528 | 6.73E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 62 | 330 | 6.61E-86 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 331 | 505 | 6.9E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 66 | 149 | 7.4E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 150 | 330 | 7.3E-60 | - |
| SMART | SM00054 | efh_1 | 405 | 433 | 4.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 441 | 469 | 4.2E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 476 | 504 | 9.2E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 64 | 322 | 9.5E-100 | IPR000719 |
| SMART | SM00054 | efh_1 | 369 | 397 | 2.7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 472 | 507 | 15.043417 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 437 | 471 | 11.891237 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 365 | 400 | 10.412781 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 64 | 322 | 48.074692 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 401 | 436 | 8.599581 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 485 | 497 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 184 | 196 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 70 | 97 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 414 | 426 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_018459496.1 | PREDICTED: calcium-dependent protein kinase 32 [Raphanus sativus] | 0 |
| Q6NLQ6 | Calcium-dependent protein kinase 32 OS=Arabidopsis thaliana OX=3702 GN=CPK32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WAA7 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007596 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology