Basic Information
Locus ID:
BniB06g055510.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Inactive serine threonine-protein kinase At1g67470-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 53835156 | 53837047 | + | BniB06g055510.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 48,005.63 Da | 32.48 | 83.51 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 6 | 179 | 6.0E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 202 | 8.45E-38 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 421 | 3.18E-5 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 68 | 256 | 1.1E-35 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 416 | 3.4E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 59 | 1.5E-5 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 254 | 20.428589 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013592449.1 | PREDICTED: non-functional pseudokinase ZED1 [Brassica oleracea var. oleracea] | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7WA96 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology