HalophFGD

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Basic Information
Locus ID: BniB06g055130.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: MATH domain and coiled-coil domain-containing protein
Maps and Mapping Data
Chromosome Start End Strand ID
B6 53677373 53678052 + BniB06g055130.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.30 9,110.33 Da 53.05 99.88 -0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 19 68 7.87009E-9 IPR002083
SUPERFAMILY SSF49599 TRAF domain-like 19 75 5.89E-8 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 77 1.5E-8 IPR008974
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G58270.1 Arabidopsis phospholipase-like protein (PEARLI 4) with TRAF-like domain. 0
RefSeq XP_022572075.2 MATH domain and coiled-coil domain-containing protein At3g58270-like isoform X1 [Brassica napus] 0
Swiss-Prot Q9M2I9 MATH domain and coiled-coil domain-containing protein At3g58270 OS=Arabidopsis thaliana OX=3702 GN=At3g58270 PE=2 SV=1 0
TrEMBL A0A8S9GEY0 MATH domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q68_00030214 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Chenopodium album 2 gene:ENSEOMG00000020776, gene:ENSEOMG00000042009
Anacardiaceae Pistacia vera 2 pistato.v30053150, pistato.v30053760
Asparagaceae Asparagus officinalis 3 AsparagusV1_04.1844.V1.1, AsparagusV1_05.3047.V1.1 ...
AsparagusV1_09.696.V1.1
Brassicaceae Arabidopsis thaliana 38 AT1G31370.1, AT1G31380.1, AT1G31390.1, AT1G31400.1 ...
AT2G01790.1, AT2G05400.1, AT2G05410.1, AT2G05420.1, AT2G05430.1, AT2G42460.1, AT2G42470.1, AT2G42480.1, AT3G27040.1, AT3G29580.1, AT3G44790.1, AT3G44800.1, AT3G44805.1, AT3G58200.1, AT3G58210.1, AT3G58220.2, AT3G58230.1, AT3G58240.1, AT3G58250.1, AT3G58260.1, AT3G58270.1, AT3G58280.1, AT3G58290.1, AT3G58320.1, AT3G58330.1, AT3G58340.1, AT3G58350.1, AT3G58360.1, AT3G58370.1, AT3G58380.1, AT3G58400.1, AT3G58410.1, AT3G58430.1, AT3G58440.1
Brassicaceae Eutrema salsugineum 38 Thhalv10005920m.g.v1.0, Thhalv10006412m.g.v1.0 ...
Thhalv10006427m.g.v1.0, Thhalv10006437m.g.v1.0, Thhalv10006449m.g.v1.0, Thhalv10006467m.g.v1.0, Thhalv10006470m.g.v1.0, Thhalv10006486m.g.v1.0, Thhalv10008254m.g.v1.0, Thhalv10010958m.g.v1.0, Thhalv10011795m.g.v1.0, Thhalv10011971m.g.v1.0, Thhalv10011981m.g.v1.0, Thhalv10011998m.g.v1.0, Thhalv10012015m.g.v1.0, Thhalv10012031m.g.v1.0, Thhalv10012069m.g.v1.0, Thhalv10012071m.g.v1.0, Thhalv10012142m.g.v1.0, Thhalv10012179m.g.v1.0, Thhalv10016883m.g.v1.0, Thhalv10017071m.g.v1.0, Thhalv10017566m.g.v1.0, Thhalv10023572m.g.v1.0, Thhalv10023616m.g.v1.0, Thhalv10023897m.g.v1.0, Thhalv10023954m.g.v1.0, Thhalv10023996m.g.v1.0, Thhalv10024005m.g.v1.0, Thhalv10024153m.g.v1.0, Thhalv10026867m.g.v1.0, Thhalv10028053m.g.v1.0, Thhalv10028058m.g.v1.0, Thhalv10028109m.g.v1.0, Thhalv10028307m.g.v1.0, Thhalv10028318m.g.v1.0, Thhalv10029184m.g.v1.0, Thhalv10029219m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g34680.v2.2, Sp2g04170.v2.2, Sp2g04180.v2.2 ...
Sp4g24600.v2.2, Sp4g24610.v2.2, Sp5g04440.v2.2, Sp5g04450.v2.2, Sp5g04453.v2.2, Sp5g04457.v2.2, Sp5g04460.v2.2, Sp5g04480.v2.2, Sp5g04500.v2.2, Sp5g04510.v2.2, Sp5g21580.v2.2, Sp6g09200.v2.2, Sp6g09210.v2.2, Sp7g05400.v2.2, SpUn0053_0040.v2.2
Brassicaceae Brassica nigra 59 BniB01g003420.2N, BniB01g003430.2N, BniB01g003440.2N ...
BniB01g003450.2N, BniB01g025850.2N, BniB02g000230.2N, BniB02g001350.2N, BniB02g040450.2N, BniB02g049390.2N, BniB02g051720.2N, BniB03g001240.2N, BniB03g010160.2N, BniB03g011950.2N, BniB03g051100.2N, BniB03g052390.2N, BniB03g055960.2N, BniB04g020230.2N, BniB04g020250.2N, BniB04g020290.2N, BniB04g020300.2N, BniB04g020330.2N, BniB06g001540.2N, BniB06g054900.2N, BniB06g054910.2N, BniB06g054920.2N, BniB06g054930.2N, BniB06g054940.2N, BniB06g054960.2N, BniB06g054970.2N, BniB06g054980.2N, BniB06g054990.2N, BniB06g055000.2N, BniB06g055010.2N, BniB06g055020.2N, BniB06g055030.2N, BniB06g055040.2N, BniB06g055050.2N, BniB06g055060.2N, BniB06g055080.2N, BniB06g055090.2N, BniB06g055100.2N, BniB06g055120.2N, BniB06g055130.2N, BniB06g055140.2N, BniB06g055150.2N, BniB06g063480.2N, BniB06g063490.2N, BniB06g063500.2N, BniB06g063510.2N, BniB06g063530.2N, BniB06g063540.2N, BniB07g008670.2N, BniB07g045970.2N, BniB07g046280.2N, BniB07g046490.2N, BniB08g027490.2N, BniB08g072890.2N, BniB08g072950.2N, BniB08g073000.2N
Casuarinaceae Casuarina glauca 1 Cgl05G1118
Plantaginaceae Plantago ovata 1 Pov_00021253
Poaceae Zoysia japonica 1 nbis-gene-36802
Salicaceae Populus euphratica 1 populus_peu12364
Solanaceae Solanum pennellii 1 gene-LOC107019779
Zosteraceae Zostera marina 6 Zosma01g13790.v3.1, Zosma02g07570.v3.1, Zosma03g09470.v3.1 ...
Zosma03g10120.v3.1, Zosma05g15530.v3.1, Zosma05g17230.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.