Basic Information
Locus ID:
BniB06g053090.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 52775521 | 52777800 | - | BniB06g053090.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 62,886.67 Da | 55.37 | 79.05 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 143 | 225 | 1.12E-13 | - |
| Pfam | PF07707 | BTB And C-terminal Kelch | 265 | 357 | 1.5E-9 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 143 | 239 | 1.1E-13 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 441 | 553 | 1.44E-6 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 147 | 239 | 1.02E-12 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 278 | 380 | 3.3E-13 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 137 | 277 | 3.2E-17 | IPR011333 |
| SMART | SM00875 | BACK_2 | 257 | 359 | 4.1E-8 | IPR011705 |
| SMART | SM00225 | BTB_4 | 142 | 242 | 4.7E-9 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 142 | 211 | 13.301571 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61600.2 | POZ/BTB containin G-protein 1. POZ/BTB containing-protein AtPOB1 | 0 |
| RefSeq | XP_013648451.2 | BTB/POZ domain-containing protein POB1 isoform X3 [Brassica napus] | 0 |
| Q9FPW6 | BTB/POZ domain-containing protein POB1 OS=Arabidopsis thaliana OX=3702 GN=POB1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A8X8B5B5 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007367 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology