Basic Information
Locus ID:
BniB06g051250.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 51898295 | 51901020 | - | BniB06g051250.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 68,626.51 Da | 50.10 | 71.87 | -0.82 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 440 | 481 | 9.63E-7 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 68 | 236 | 1.05E-6 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 438 | 486 | 4.1E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 341 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 429 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_018444421.1 | PREDICTED: uncharacterized protein LOC108816345 [Raphanus sativus] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A8X8B580 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007247 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology