Basic Information
Locus ID:
BniB06g050970.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 51765057 | 51769717 | - | BniB06g050970.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 132,247.73 Da | 49.75 | 71.64 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06410 | PB1_UP2 | 134 | 230 | 9.35402E-45 | - |
| CDD | cd13999 | STKc_MAP3K-like | 928 | 1185 | 2.50112E-109 | - |
| Pfam | PF00564 | PB1 domain | 147 | 230 | 4.0E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 923 | 1184 | 9.3E-62 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 147 | 234 | 4.46E-18 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 914 | 1183 | 4.02E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1010 | 1204 | 4.3E-53 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 149 | 232 | 9.6E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 915 | 1009 | 3.8E-25 | - |
| SMART | SM00220 | serkin_6 | 922 | 1188 | 2.5E-57 | IPR000719 |
| SMART | SM00666 | PB1_new | 145 | 232 | 7.7E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 922 | 1187 | 41.516518 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 928 | 953 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1047 | 1059 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1041 | 1059 | 2.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1112 | 1134 | 2.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1004 | 1017 | 2.9E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1156 | 1178 | 2.9E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 570 | 589 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 516 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 616 | 655 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 464 | 491 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_013701609.2 | uncharacterized protein LOC106405637 [Brassica napus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816YU79 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_A07P27060.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology