Basic Information
Locus ID:
BniB06g050290.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Short Name:
SAPK2
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 51368672 | 51370368 | - | BniB06g050290.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 38,199.88 Da | 40.46 | 85.50 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14662 | STKc_SnRK2 | 3 | 259 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 260 | 7.0E-70 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 269 | 1.48E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 80 | 267 | 2.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 79 | 3.9E-32 | - |
| SMART | SM00220 | serkin_6 | 4 | 260 | 1.2E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 260 | 46.731964 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance)
map01521 (EGFR tyrosine kinase inhibitor resistance)
ko03010 (Ribosome)
map03010 (Ribosome)
ko04066 (HIF-1 signaling pathway)
map04066 (HIF-1 signaling pathway)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78290.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009104577.1 | serine/threonine-protein kinase SRK2C [Brassica rapa] | 0 |
| Q9M9E9 | Serine/threonine-protein kinase SRK2C OS=Arabidopsis thaliana OX=3702 GN=SRK2C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7W8S0 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_007163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology