Basic Information
Locus ID:
BniB06g049840.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
proline-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 51094587 | 51094934 | - | BniB06g049840.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.47 | 13,043.27 Da | 55.58 | 70.44 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 5 | 97 | 1.6E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 103 | 2.11E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 114 | 4.4E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 101 | 9.559545 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_022568663.2 | receptor-like kinase TMK2 [Brassica napus] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816QG08 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C06P31140.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah035048 |
| Arecaceae | Cocos nucifera | 1 | COCNU_03G003140 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29654.1 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g19770.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g043510.2N, BniB06g049840.2N, BniB07g004410.2N |
| Casuarinaceae | Casuarina equisetifolia | 3 | Ceq07G0586, Ceq07G0670, Ceq07G0689 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl07G0667, Cgl07G0681 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0300088 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44088 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-12693 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19761 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.734 |