Basic Information
Locus ID:
BniB06g046820.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Protein kinase C terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 49387578 | 49390491 | - | BniB06g046820.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.42 | 65,252.17 Da | 43.76 | 66.68 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 134 | 492 | 0.0 | - |
| Pfam | PF00433 | Protein kinase C terminal domain | 446 | 491 | 8.9E-6 | IPR017892 |
| Pfam | PF00069 | Protein kinase domain | 137 | 427 | 4.6E-67 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 109 | 472 | 2.29E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 134 | 456 | 7.0E-108 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 220 | 445 | 7.0E-108 | - |
| SMART | SM00133 | pkinase_C_6 | 428 | 493 | 8.4E-7 | IPR000961 |
| SMART | SM00220 | serkin_6 | 136 | 427 | 4.0E-106 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 428 | 501 | 14.155426 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 136 | 427 | 48.9086 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 142 | 165 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 255 | 267 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 566 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 551 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 511 | 566 | - | - |
| Coils | Coil | Coil | 78 | 98 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03920.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_018464174.1 | PREDICTED: serine/threonine-protein kinase tricorner [Raphanus sativus] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | A0A6J0LXU2 | serine/threonine-protein kinase tricorner OS=Raphanus sativus OX=3726 GN=LOC108835417 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology