Basic Information
Locus ID:
BniB06g042050.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46591118 | 46592793 | + | BniB06g042050.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 43,863.29 Da | 34.27 | 87.36 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 48 | 317 | 1.14975E-97 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 314 | 2.5E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 315 | 3.64E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 118 | 329 | 2.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 14 | 117 | 1.5E-35 | - |
| SMART | SM00220 | serkin_6 | 42 | 315 | 3.9E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 42 | 321 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 166 | 178 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 48 | 70 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 394 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 394 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009149104.1 | cold-responsive protein kinase 1 [Brassica rapa] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X7QDJ8 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_062999 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology