Basic Information
Locus ID:
BniB06g041600.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
(E 0.0) protein kinase family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46350098 | 46354232 | + | BniB06g041600.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 126,182.06 Da | 55.62 | 71.58 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 861 | 1118 | 3.86537E-109 | - |
| CDD | cd06410 | PB1_UP2 | 148 | 244 | 4.35681E-49 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 856 | 1116 | 4.1E-61 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 161 | 245 | 2.3E-21 | IPR000270 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 842 | 1116 | 9.7E-76 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 161 | 247 | 2.65E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 163 | 246 | 7.6E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 848 | 942 | 6.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 943 | 1140 | 5.6E-53 | - |
| SMART | SM00220 | serkin_6 | 855 | 1121 | 9.0E-57 | IPR000719 |
| SMART | SM00666 | PB1_new | 159 | 246 | 9.4E-34 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 855 | 1120 | 40.739147 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 861 | 886 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 980 | 992 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 974 | 992 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1045 | 1067 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 937 | 950 | 1.8E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1089 | 1111 | 1.8E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 836 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 515 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_048614127.1 | uncharacterized protein LOC106396481 [Brassica napus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0D3CAP9 | Protein kinase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 GN=106295370 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology