Basic Information
Locus ID:
BniB06g041570.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46325376 | 46325589 | + | BniB06g041570.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 5,435.09 Da | 34.39 | 87.35 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 37 | 7.7E-8 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 38 | 8.61E-11 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 47 | 1.2E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 49 | 10.987079 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_052177961.1 | uncharacterized protein LOC127791857 isoform X4 [Diospyros lotus] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8S9KBR5 | Protein kinase domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q70_00041632 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 11 | Sgl18095, Sgl43118, Sgl47944, Sgl54011, Sgl59343, Sgl65393 ... |
| Brassicaceae | Brassica nigra | 1 | BniB06g041570.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g06040 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.245 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16698 |