Basic Information
Locus ID:
BniB06g041500.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
wall-associated receptor kinase-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46305528 | 46306088 | + | BniB06g041500.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.66 | 21,241.94 Da | 45.98 | 84.84 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 154 | 3.4E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 162 | 2.35E-39 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 184 | 1.0E-47 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 161 | 23.764214 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 9 | 21 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 186 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 186 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16120.1 | wall associated kinase-like 1. wall-associated kinase like | 0 |
| RefSeq | XP_010476723.1 | PREDICTED: wall-associated receptor kinase-like 1 [Camelina sativa] | 0 |
| Q9S9M5 | Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7W691 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_006597 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg62120 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000042724 |
| Brassicaceae | Brassica nigra | 1 | BniB06g041500.2N |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g00370, gene.Thate01g00380 |
| Poaceae | Oryza coarctata | 1 | Oco04G019770 |