Basic Information
Locus ID:
BniB06g041310.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46217357 | 46220354 | + | BniB06g041310.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 78,707.54 Da | 48.27 | 64.34 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 443 | 483 | 4.81E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 436 | 491 | 5.4E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 588 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 170 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 338 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 523 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 317 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 359 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 277 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 441 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15940.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_048638324.1 | sister chromatid cohesion protein PDS5 homolog E-like isoform X2 [Brassica napus] | 0 |
| Q9S9P0 | Sister chromatid cohesion protein PDS5 homolog E OS=Arabidopsis thaliana OX=3702 GN=PDS5E PE=2 SV=1 | 0 | |
| TrEMBL | A0A3P5YDZ7 | (field mustard) hypothetical protein OS=Brassica campestris OX=3711 GN=BRAA06T24367Z PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology