Basic Information
Locus ID:
BniB06g041020.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
kelch repeat-containing F-box family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 46094525 | 46095601 | + | BniB06g041020.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.44 | 39,545.37 Da | 52.04 | 78.13 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 111 | 153 | 1.4E-5 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 170 | 203 | 1.4E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 77 | 342 | 8.11E-40 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 47 | 355 | 5.4E-38 | IPR015915 |
| SMART | SM00612 | kelc_smart | 169 | 216 | 1.9E-5 | IPR006652 |
| SMART | SM00612 | kelc_smart | 118 | 166 | 0.13 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G15670.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_048638306.1 | F-box/kelch-repeat protein At1g15670-like [Brassica napus] | 0 |
| Q9LMR5 | F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8X7U6U4 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_062980 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology