Basic Information
Locus ID:
BniB06g030320.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 21237503 | 21239933 | + | BniB06g030320.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.23 | 77,190.85 Da | 42.63 | 86.85 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 138 | 198 | 5.5E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 45 | 88 | 7.3E-10 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 383 | 650 | 6.0E-25 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 73 | 231 | 9.19E-27 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 657 | 3.65E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 454 | 3.6E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 455 | 673 | 1.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 216 | 251 | 1.8E-5 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 210 | 6.6E-32 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 655 | 24.866665 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 138 | 160 | 7.534839 | IPR001611 |
| Coils | Coil | Coil | 635 | 655 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50610.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_013710362.1 | pollen receptor-like kinase 5 [Brassica napus] | 0 |
| Q9LPT1 | Pollen receptor-like kinase 5 OS=Arabidopsis thaliana OX=3702 GN=PRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8BAU9 | Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_011163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology