HalophFGD

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Basic Information
Locus ID: BniB06g022980.2N
Species & Taxonomic ID: Brassica nigra & 3710
Genome Assembly: N100
Description: ubiquitin-protein transferase activity
Maps and Mapping Data
Chromosome Start End Strand ID
B6 13386631 13386872 + BniB06g022980.2N
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.39 9,190.07 Da 23.02 64.62 -0.80
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 1 29 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 16 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048613374.1 uncharacterized protein LOC125587211 [Brassica napus] 0
TrEMBL A0A8X7WDM3 Uncharacterized protein OS=Brassica carinata OX=52824 GN=Bca52824_010589 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Brassicaceae Eutrema salsugineum 1 Thhalv10002215m.g.v1.0
Brassicaceae Brassica nigra 24 BniB01g016270.2N, BniB01g039860.2N, BniB01g039880.2N ...
BniB01g039890.2N, BniB01g049740.2N, BniB02g018380.2N, BniB02g026360.2N, BniB02g062300.2N, BniB03g004860.2N, BniB04g023280.2N, BniB04g037930.2N, BniB04g040180.2N, BniB04g046590.2N, BniB04g049090.2N, BniB05g010610.2N, BniB05g034750.2N, BniB05g052190.2N, BniB05g056080.2N, BniB06g022980.2N, BniB07g012780.2N, BniB08g008500.2N, BniB08g037860.2N, BniB08g057580.2N, BniB08g057890.2N
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.