Basic Information
Locus ID:
BniB06g020040.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase At2g30940
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 11323987 | 11325672 | + | BniB06g020040.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 49,511.57 Da | 46.91 | 96.27 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 145 | 395 | 3.9E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 118 | 399 | 3.05E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 220 | 417 | 2.3E-32 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 109 | 219 | 2.6E-26 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 143 | 405 | 18.492231 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30940.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_013632639.1 | PREDICTED: putative receptor-like protein kinase At2g30940, partial [Brassica oleracea var. oleracea] | 0 |
| Q3EBR4 | Putative receptor-like protein kinase At2g30940 OS=Arabidopsis thaliana OX=3702 GN=At2g30940 PE=3 SV=2 | 0 | |
| TrEMBL | A0A397Z9H1 | Protein kinase domain-containing protein OS=Brassica campestris OX=3711 GN=BRARA_E01264 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G30940.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017785m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g13420.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g060120.2N, BniB06g019980.2N, BniB06g020040.2N |