Basic Information
Locus ID:
BniB06g019980.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
receptor-like protein kinase At2g30940
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 11289265 | 11290925 | + | BniB06g019980.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 29,922.22 Da | 34.10 | 96.64 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 15 | 147 | 3.7E-18 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 235 | 2.42E-39 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 86 | 5.9E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 87 | 241 | 4.5E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 262 | 17.813801 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30940.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_048610251.1 | putative receptor-like protein kinase At2g30940 [Brassica napus] | 0 |
| Q3EBR4 | Putative receptor-like protein kinase At2g30940 OS=Arabidopsis thaliana OX=3702 GN=At2g30940 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8S9R0E9 | Protein kinase domain-containing protein OS=Brassica cretica OX=69181 GN=F2Q69_00011759 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G30940.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017785m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g13420.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB04g060120.2N, BniB06g019980.2N, BniB06g020040.2N |