Basic Information
Locus ID:
BniB06g017930.2N
Species & Taxonomic ID:
Brassica nigra & 3710
Genome Assembly:
N100
Description:
npr1-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| B6 | 9826649 | 9828301 | - | BniB06g017930.2N |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 25,696.16 Da | 44.20 | 92.68 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18310 | BTB_POZ_NPR_plant | 44 | 185 | 5.4599E-72 | - |
| Pfam | PF00651 | BTB/POZ domain | 56 | 182 | 1.7E-12 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 43 | 183 | 1.41E-17 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 33 | 181 | 6.2E-21 | IPR011333 |
| SMART | SM00225 | BTB_4 | 61 | 185 | 9.9E-16 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 61 | 135 | 16.010914 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45110.2 | - | 0 |
| RefSeq | XP_013687354.1 | regulatory protein NPR3 [Brassica napus] | 0 |
| Q8L746 | Regulatory protein NPR3 OS=Arabidopsis thaliana OX=3702 GN=NPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A816MFD6 | (rape) hypothetical protein OS=Brassica napus OX=3708 GN=DARMORV10_C07P27900.1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag4G01645 |
| Brassicaceae | Brassica nigra | 5 | BniB02g071280.2N, BniB03g042370.2N, BniB05g042850.2N ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-55826 |